Uses of Package
org.peace_tools.data

Packages that use org.peace_tools.data

org.peace_tools.core.dataset	Contains the classes associated with the data set wizard.
org.peace_tools.data	Contains the classes that provide data for the various views in the GUI.
org.peace_tools.views	Contains the classes that provide views for the various data objects in the GUI.
org.peace_tools.views.overlap	Contains the classes that provide a custom overlap view of clusters.

Classes in org.peace_tools.data used by org.peace_tools.core.dataset

ESTList
Class to encapsulate a list of ESTs.

Classes in org.peace_tools.data used by org.peace_tools.data

ClusterFile
The top-level class that encapsulates all the pertinent information regarding a cluster data file.

ClusterNode
A class that represents a single cluster in a cluster tree.

DataStore
A helper class to load and maintain data files.

EST

ESTEntry
A class that represents a single EST entry in PreAlignmentModel.

ESTList
Class to encapsulate a list of ESTs.

LowMemoryException
A simple exception to report a low memory condition.

MST
The top-level class that encapsulates all the pertinent information regarding a MST data file.

MSTNode
A class that represents a single node in a Minimum Spanning Tree (MST).

OverlapModel
A custom data model to provide pre-alignment information using MST and clustering data.

Classes in org.peace_tools.data used by org.peace_tools.views

ClusterFile
The top-level class that encapsulates all the pertinent information regarding a cluster data file.

ClusterNode
A class that represents a single cluster in a cluster tree.

ClusterTreeTableModel
The tree table model that provides a facade to display cluster information in a tree-table.

DataSetTableModel

DataSetTreeModel
A bridge class between a Workspace and a JTree.

ESTList
Class to encapsulate a list of ESTs.

ESTTableModel
A bridge class between FASTA entries in a FASTA file and a JTable.

JobListTableModel
A bridge class between Job entries in a workspace and a JTable.

MSTTreeModel
A bridge class between a MST and a JTree.

ServerListTableModel
A bridge class between Server entries in a workspace and a JTable.

Classes in org.peace_tools.data used by org.peace_tools.views.overlap

ClusterFile
The top-level class that encapsulates all the pertinent information regarding a cluster data file.

ESTEntry
A class that represents a single EST entry in PreAlignmentModel.

OverlapModel
A custom data model to provide pre-alignment information using MST and clustering data.