PMSTHeapCache Member List

This is the complete list of members for PMSTHeapCache, including all inherited members.

analyzer	MSTCache	[protected]
copy_n(const SMList &input, const size_t count, SMList &output)	MSTCache	[protected, static]
displayStats(std::ostream &os, const int MyRank) const	MSTHeapCache	[virtual]
getBestEntry(int &srcESTidx, int &destESTidx, float &metric, int &alignmentData, int &directionData) const	MSTHeapCache	[virtual]
isESTinMST(const int estIdx) const	MSTCache	[inline]
maxCachePerEST	MSTCache	[protected]
mergeList(const int estIdx, const SMList &list)	MSTHeapCache	[virtual]
MSTCache(const int totalESTCount, const int startOwnESTidx, const int numOwnESTs, const ESTAnalyzer *analyzer, const bool repopulateCaches, const int maxCachePerEST)	MSTCache	[protected]
MSTHeapCache(const int totalESTCount, const int startOwnESTidx, const int numOwnESTs, const ESTAnalyzer *analyzer, const bool repopulateCaches, const int maxCachePerEST)	MSTHeapCache
nodesAdded	MSTCache	[protected]
numOwnESTs	MSTCache	[protected]
PMSTHeapCache(const int totalESTCount, const int startOwnESTidx, const int numOwnESTs, const ESTAnalyzer *analyzer)	PMSTHeapCache
popBestEntry(int &srcESTidx, int &destESTidx, float &metric, int &alignmentData)	PMSTHeapCache	[virtual]
popCache()	MSTHeapCache	[protected, virtual]
preprocess(SMList &list)	MSTCache	[inline, virtual]
pruneCaches(const int estIdxAdded, std::vector< int > &repopulateList, const bool prefixListSize=true)	MSTHeapCache	[virtual]
repopulateCaches	MSTCache	[protected]
startOwnESTidx	MSTCache	[protected]
~MSTCache()	MSTCache	[inline, virtual]
~MSTHeapCache()	MSTHeapCache	[inline, virtual]
~PMSTHeapCache()	PMSTHeapCache	[inline, virtual]