LCFilter Member List

This is the complete list of members for LCFilter, including all inherited members.

addDummyEntry(const std::string &fastaID, const std::string &seq, const int length)	LCFilter	[protected, virtual]
addFilterData(std::vector< int > &superList) const	Filter
applyFilter(const int otherEST)	Filter
argsList	LCFilter	[private, static]
clusterMaker	Filter	[protected]
DefaultPatternList	LCFilter	[private, static]
dummyESTList	LCFilter	[private]
Filter(const std::string &filterName, ClusterMaker *clusterMaker)	Filter	[protected]
FilterFactory class	LCFilter	[friend]
filterName	Filter	[protected]
finalize()	LCFilter	[virtual]
getFilterCount()	Filter	[inline]
getName() const	Filter	[inline]
getRunCount()	Filter	[inline]
initialize()	LCFilter	[virtual]
LCFilter(ClusterMaker *clusterMaker)	LCFilter	[protected]
operator=(const LCFilter &src)	LCFilter	[private]
parseArguments(int &argc, char **argv)	LCFilter	[virtual]
patternList	LCFilter	[private, static]
printStats(std::ostream &os) const	Filter	[virtual]
processFilterData(const std::vector< int > &superList, ClusterMaker *clusterMaker)	Filter	[static]
runFilter(const int estIdx)	LCFilter	[protected, virtual]
showArguments(std::ostream &os)	LCFilter	[virtual]
threshold	LCFilter	[private, static]
~Filter()	Filter	[virtual]
~LCFilter()	LCFilter	[inline, virtual]